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2015


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Developing biorobotics for veterinary research into cat movements

Mariti, C., Muscolo, G., Peters, J., Puig, D., Recchiuto, C., Sighieri, C., Solanas, A., von Stryk, O.

Journal of Veterinary Behavior: Clinical Applications and Research, 10(3):248-254, 2015 (article)

ei

DOI [BibTex]

2015


DOI [BibTex]


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Spatial statistics and attentional dynamics in scene viewing

Engbert, R., Trukenbrod, H., Barthelmé, S., Wichmann, F.

Journal of Vision, 15(1):1-17, 2015 (article)

ei

Web PDF link (url) DOI [BibTex]

Web PDF link (url) DOI [BibTex]


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The Randomized Causation Coefficient

Lopez-Paz, D., Muandet, K., Recht, B.

Journal of Machine Learning, 16, pages: 2901-2907, 2015 (article)

ei

link (url) [BibTex]

link (url) [BibTex]


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Towards denoising XMCD movies of fast magnetization dynamics using extended Kalman filter

Kopp, M., Harmeling, S., Schütz, G., Schölkopf, B., Fähnle, M.

Ultramicroscopy, 148, pages: 115-122, 2015 (article)

Abstract
The Kalman filter is a well-established approach to get information on the time-dependent state of a system from noisy observations. It was developed in the context of the Apollo project to see the deviation of the true trajectory of a rocket from the desired trajectory. Afterwards it was applied to many different systems with small numbers of components of the respective state vector (typically about 10). In all cases the equation of motion for the state vector was known exactly. The fast dissipative magnetization dynamics is often investigated by x-ray magnetic circular dichroism movies (XMCD movies), which are often very noisy. In this situation the number of components of the state vector is extremely large (about 105), and the equation of motion for the dissipative magnetization dynamics (especially the values of the material parameters of this equation) is not well known. In the present paper it is shown by theoretical considerations that – nevertheless – there is no principle problem for the use of the Kalman filter to denoise XMCD movies of fast dissipative magnetization dynamics.

ei

Web DOI [BibTex]

Web DOI [BibTex]


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Artificial intelligence: Learning to see and act

Schölkopf, B.

Nature, News & Views, 518(7540):486-487, 2015 (article)

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DOI [BibTex]

DOI [BibTex]


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Context affects lightness at the level of surfaces

Maertens, M., Wichmann, F., Shapley, R.

Journal of Vision, 15(1):1-15, 2015 (article)

ei

Web PDF link (url) DOI [BibTex]

Web PDF link (url) DOI [BibTex]


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Genome-wide analysis of local chromatin packing in Arabidopsis thaliana

Wang, C., Liu, C., Roqueiro, D., Grimm, D., Schwab, R., Becker, C., Lanz, C., Weigel, D.

Genome Research, 25(2):246-256, 2015 (article)

ei

PDF DOI [BibTex]

PDF DOI [BibTex]


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A Cognitive Brain-Computer Interface for Patients with Amyotrophic Lateral Sclerosis

Hohmann, M.

Graduate Training Centre of Neuroscience, University of Tübingen, Germany, 2015 (mastersthesis)

ei

[BibTex]

[BibTex]


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Segmentation-based attenuation correction in positron emission tomography/magnetic resonance: erroneous tissue identification and its impact on positron emission tomography interpretation

Brendle, C., Schmidt, H., Oergel, A., Bezrukov, I., Mueller, M., Schraml, C., Pfannenberg, C., la Fougère, C., Nikolaou, K., Schwenzer, N.

Investigative Radiology, 50(5):339-346, 2015 (article)

ei

DOI [BibTex]

DOI [BibTex]


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Isosteric heat of hydrogen adsorption on MOFs: comparison between adsorption calorimetry, sorption isosteric metod, and analytical models

Kloutse, A. F., Zacharia, R., Cossement, D., Chahine, R., Balderas-Xicohténcatl, R., Oh, H., Streppel, B., Schlichtenmayer, M., Hirscher, M.

{Applied Physics A}, 121(4):1417-1424, Springer-Verlag Heidelberg, Heidelberg, 2015 (article)

mms

DOI [BibTex]

DOI [BibTex]


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Active Reward Learning with a Novel Acquisition Function

Daniel, C., Kroemer, O., Viering, M., Metz, J., Peters, J.

Autonomous Robots, 39(3):389-405, 2015 (article)

am ei

link (url) DOI [BibTex]

link (url) DOI [BibTex]


Metric Regression Forests for Correspondence Estimation
Metric Regression Forests for Correspondence Estimation

Pons-Moll, G., Taylor, J., Shotton, J., Hertzmann, A., Fitzgibbon, A.

International Journal of Computer Vision, pages: 1-13, 2015 (article)

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springer PDF Project Page [BibTex]

springer PDF Project Page [BibTex]


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Precise Localization and Control of Catalytic Janus Micromotors using Weak Magnetic Fields

Khalil, I. S., Magdanz, V., Sanchez, S., Schmidt, O. G., Misra, S.

{International Journal of Advanced Robotic Systems}, 12, InTech, Rijeka, Croatia, 2015 (article)

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DOI [BibTex]

DOI [BibTex]


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Nano-photocatalysts in microfluidics, energy conversion and environmental applications

Parmar, J., Jang, S., Soler, L., Kim, D., Sánchez, S.

{Lab on a Chip}, 15(11):2352-2356, Royal Society of Chemistry, 2015 (article)

icm

DOI [BibTex]

DOI [BibTex]


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Chemically Powered Micro-and Nanomotors

Sánchez, S., Soler, L., Katuri, J.

{Angewandte Chemie, International Edition}, 54(5):1414-1444, Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim, 2015 (article)

icm

[BibTex]

[BibTex]


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Static dielectric properties of dense ionic fluids

Zarubin, G., Bier, M.

{The Journal of Chemical Physics}, 142(18), American Institute of Physics, Woodbury, N.Y., 2015 (article)

icm

DOI [BibTex]

DOI [BibTex]


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Geometrically Tuned Channel Permeability

Malgaretti, P., Pagonabarraga, I., Rubi, J. M.

{Macromolecular Symposia}, 357(1):178-188, WILEY-VCH Verlag GmbH, Weinheim, Fed. Rep. of Germany, 2015 (article)

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DOI [BibTex]

DOI [BibTex]


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A systematic search for transiting planets in the K2 data

Foreman-Mackey, D., Montet, B., Hogg, D., Morton, T., Wang, D., Schölkopf, B.

The Astrophysical Journal, 806(2), 2015 (article)

Abstract
Photometry of stars from the K2 extension of NASA’s Kepler mission is afflicted by systematic effects caused by small (few-pixel) drifts in the telescope pointing and other spacecraft issues. We present a method for searching K2 light curves for evidence of exoplanets by simultaneously fitting for these systematics and the transit signals of interest. This method is more computationally expensive than standard search algorithms but we demonstrate that it can be efficiently implemented and used to discover transit signals. We apply this method to the full Campaign 1 data set and report a list of 36 planet candidates transiting 31 stars, along with an analysis of the pipeline performance and detection efficiency based on artificial signal injections and recoveries. For all planet candidates, we present posterior distributions on the properties of each system based strictly on the transit observables.

ei

link (url) DOI [BibTex]

link (url) DOI [BibTex]


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Learning Movement Primitive Attractor Goals and Sequential Skills from Kinesthetic Demonstrations

Manschitz, S., Kober, J., Gienger, M., Peters, J.

Robotics and Autonomous Systems, 74, Part A, pages: 97-107, 2015 (article)

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link (url) DOI [BibTex]

link (url) DOI [BibTex]


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Bayesian Optimization for Learning Gaits under Uncertainty

Calandra, R., Seyfarth, A., Peters, J., Deisenroth, M.

Annals of Mathematics and Artificial Intelligence, pages: 1-19, 2015 (article)

am ei

DOI [BibTex]

DOI [BibTex]


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Assessment of murine brain tissue shrinkage caused by different histological fixatives using magnetic resonance and computed tomography imaging

Wehrl, H. F., Bezrukov, I., Wiehr, S., Lehnhoff, M., Fuchs, K., Mannheim, J. G., Quintanilla-Martinez, L., Kneilling, M., Pichler, B. J., Sauter, A. W.

Histology and Histopathology, 30(5):601-613, 2015 (article)

ei

[BibTex]

[BibTex]


Selectable Nanopattern Arrays for Nanolithographic Imprint and Etch-Mask Applications
Selectable Nanopattern Arrays for Nanolithographic Imprint and Etch-Mask Applications

Jeong, H. H., Mark, A. G., Lee, T., Son, K., Chen, W., Alarcon-Correa, M., Kim, I., Schütz, G., Fischer, P.

Adv. Science, 2(7):1500016, 2015, Featured cover article. (article)

Abstract
A parallel nanolithographic patterning method is presented that can be used to obtain arrays of multifunctional nanoparticles. These patterns can simply be converted into a variety of secondary nanopatterns that are useful for nanolithographic imprint, plasmonic, and etch-mask applications.

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link (url) DOI [BibTex]

link (url) DOI [BibTex]


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Improved Bayesian Information Criterion for Mixture Model Selection

Mehrjou, A., Hosseini, R., Araabi, B.

Pattern Recognition Letters, 69, pages: 22-27, 2015 (article)

ei

DOI [BibTex]

DOI [BibTex]


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Applications of three-dimensional (3D) printing for microswimmers and bio-hybrid robotics

Stanton, M. M., Trichet-Paredes, C., Sanchez, S.

{Lab on a Chip}, 15(7):1634-1637, Royal Society of Chemistry, Cambridge, 2015 (article)

icm

DOI [BibTex]

DOI [BibTex]


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Rheotaxis of spherical active particles near a planar wall

Uspal, W. E., Popescu, M. N., Dietrich, S., Tasinkevych, M.

{Soft Matter}, 11(33):6613-6632, Royal Society of Chemistry, Cambridge, UK, 2015 (article)

icm

DOI [BibTex]

DOI [BibTex]


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Phase diagram of fluid phases in He3\textminusHe4 mixtures

Farahmand Bafi, N., Maciolek, A., Dietrich, S.

{Physical Review E}, 91(2), American Physical Society, Melville, NY, 2015 (article)

icm

DOI [BibTex]

DOI [BibTex]


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Three-body critical Casimir forces

Gomes de Mattos, T., Harnau, L., Dietrich, S.

{Physical Review E}, 91(4), American Physical Society, Melville, NY, 2015 (article)

icm

DOI [BibTex]

DOI [BibTex]


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Linear and nonlinear magnetic properties of ferrofluids

Szalai, I., Nagy, S., Dietrich, S.

{Physical Review E}, 92(4), American Physical Society, Melville, NY, 2015 (article)

icm

DOI [BibTex]

DOI [BibTex]


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Microfluidic-Assisted Fabrication of Flexible and Location Traceable Organo-Motor

Seo, K. D., Kwak, B. K., Sanchez, S., Kim, D. S.

{IEEE Transactions on Nanobioscience}, 14(3):298-304, IEEE, New York, NY, 2015 (article)

icm

DOI [BibTex]

DOI [BibTex]


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Thermal and structural properties of ionic fluids

Bartsch, H., Dannenmann, O., Bier, M.

{Physical Review E}, 91(4), American Physical Society, Melville, NY, 2015 (article)

icm

DOI [BibTex]

DOI [BibTex]


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Tracer diffusion of hard-sphere binary mixtures under nano-confinement

Marconi, U., Malgaretti, P., Pagonabarraga, I.

{The Journal of Chemical Physics}, 143(18), American Institute of Physics, Woodbury, N.Y., 2015 (article)

icm

DOI [BibTex]

DOI [BibTex]


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Fluctuational electrodynamics for nonlinear media

Soo, H.

Universität Stuttgart, Stuttgart, 2015 (mastersthesis)

icm

[BibTex]

[BibTex]


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Fluctuating multicomponent lattice Boltzmann model

Belardinelli, D., Sbragaglia, M., Biferale, L., Gross, M., Varnik, F.

{Physical Review E}, 91(2), American Physical Society, Melville, NY, 2015 (article)

icm

DOI [BibTex]

DOI [BibTex]


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Correlation matrix nearness and completion under observation uncertainty

Alaíz, C. M., Dinuzzo, F., Sra, S.

IMA Journal of Numerical Analysis, 35(1):325-340, 2015 (article)

ei

DOI [BibTex]

DOI [BibTex]


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Quantitative evaluation of segmentation- and atlas- based attenuation correction for PET/MR on pediatric patients

Bezrukov, I., Schmidt, H., Gatidis, S., Mantlik, F., Schäfer, J. F., Schwenzer, N., Pichler, B. J.

Journal of Nuclear Medicine, 56(7):1067-1074, 2015 (article)

ei

DOI [BibTex]

DOI [BibTex]


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Sequential Image Deconvolution Using Probabilistic Linear Algebra

Gao, M.

Technical University of Munich, Germany, 2015 (mastersthesis)

ei

[BibTex]

[BibTex]


Exciting Engineered Passive Dynamics in a Bipedal Robot
Exciting Engineered Passive Dynamics in a Bipedal Robot

Renjewski, D., Spröwitz, A., Peekema, A., Jones, M., Hurst, J.

{IEEE Transactions on Robotics and Automation}, 31(5):1244-1251, IEEE, New York, NY, 2015 (article)

Abstract
A common approach in designing legged robots is to build fully actuated machines and control the machine dynamics entirely in soft- ware, carefully avoiding impacts and expending a lot of energy. However, these machines are outperformed by their human and animal counterparts. Animals achieve their impressive agility, efficiency, and robustness through a close integration of passive dynamics, implemented through mechanical components, and neural control. Robots can benefit from this same integrated approach, but a strong theoretical framework is required to design the passive dynamics of a machine and exploit them for control. For this framework, we use a bipedal spring–mass model, which has been shown to approximate the dynamics of human locomotion. This paper reports the first implementation of spring–mass walking on a bipedal robot. We present the use of template dynamics as a control objective exploiting the engineered passive spring–mass dynamics of the ATRIAS robot. The results highlight the benefits of combining passive dynamics with dynamics-based control and open up a library of spring–mass model-based control strategies for dynamic gait control of robots.

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link (url) DOI Project Page [BibTex]

link (url) DOI Project Page [BibTex]


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Frenetic aspects of second order response

Basu, U., Krüger, M., Lazarescu, A., Maes, C.

{Physical Chemistry Chemical Physics}, 17(9):6653-6666, Royal Society of Chemistry, Cambridge, England, 2015 (article)

icm

DOI [BibTex]

DOI [BibTex]


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Lab-in-a-tube systems as ultra-compact devices

Sanchez, S.

{Lab chip}, (3):610-613, 2015 (article)

Abstract
{In this Focus article, I will give an overview on the current and future interests of our multidisciplinary research group. One of our main interests is to develop highly integrated on-chip components towards ultra-compact devices for biosensing technologies (lab-in-a-tube). Our other activities are focused in developing self-powered devices that can generate either motion of a fluid or autonomous propulsion. We are particularly interested in three-dimensional (3D) nanofabrication technologies and stimuli responsive soft materials.}

icm

DOI [BibTex]

DOI [BibTex]


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Critical Casimir forces in the presence of random surface fields

Maciolek, A., Vasilyev, O., Dotsenko, V., Dietrich, S.

{Physical Review E}, 91(3), American Physical Society, Melville, NY, 2015 (article)

icm

DOI [BibTex]

DOI [BibTex]


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Catalytic Mesoporous Janus Nanomotors for Active Cargo Delivery

Ma, X., Hahn, K., Sanchez, S.

{Journal of the American Chemical Society}, 137(15):4976-4979, ACS Publications, 2015 (article)

icm

DOI [BibTex]

DOI [BibTex]


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Guest Editorial: Special Issue: Micro- and Nanomachines

Paxton, W., Sanchez, S., Nitta, T.

{IEEE Transactions on Nanobioscience}, 14(3):258-259, IEEE, New York, NY, 2015 (article)

icm

DOI [BibTex]

DOI [BibTex]


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Self-Assembly via Microfluidics

Wang, L., Sanchez, S.

{Lab on a Chip}, 15(23):4383-4386, Royal Society of Chemistry, Cambridge, 2015 (article)

icm

DOI [BibTex]

DOI [BibTex]


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Operator Formalism for Topology-Conserving Crossing Dynamics in Planar Knot Diagrams

Rohwer, C. M., Müller-Nedebock, K. K.

{Journal of Statistical Physics}, 159(1):120-157, Kluwer Academic Publishers [etc.], New York, 2015 (article)

icm

DOI [BibTex]

DOI [BibTex]


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Nonequilibrium interfacial tension during relaxation

Bier, M.

{Physical Review E}, 92(4), American Physical Society, Melville, NY, 2015 (article)

icm

DOI [BibTex]

DOI [BibTex]


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Probabilistic numerics and uncertainty in computations

Hennig, P., Osborne, M. A., Girolami, M.

Proceedings of the Royal Society of London A: Mathematical, Physical and Engineering Sciences, 471(2179), 2015 (article)

Abstract
We deliver a call to arms for probabilistic numerical methods: algorithms for numerical tasks, including linear algebra, integration, optimization and solving differential equations, that return uncertainties in their calculations. Such uncertainties, arising from the loss of precision induced by numerical calculation with limited time or hardware, are important for much contemporary science and industry. Within applications such as climate science and astrophysics, the need to make decisions on the basis of computations with large and complex data have led to a renewed focus on the management of numerical uncertainty. We describe how several seminal classic numerical methods can be interpreted naturally as probabilistic inference. We then show that the probabilistic view suggests new algorithms that can flexibly be adapted to suit application specifics, while delivering improved empirical performance. We provide concrete illustrations of the benefits of probabilistic numeric algorithms on real scientific problems from astrometry and astronomical imaging, while highlighting open problems with these new algorithms. Finally, we describe how probabilistic numerical methods provide a coherent framework for identifying the uncertainty in calculations performed with a combination of numerical algorithms (e.g. both numerical optimizers and differential equation solvers), potentially allowing the diagnosis (and control) of error sources in computations.

ei pn

PDF DOI [BibTex]

PDF DOI [BibTex]


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Mass and galaxy distributions of four massive galaxy clusters from Dark Energy Survey Science Verification data

Melchior, P., Suchyta, E., Huff, E., Hirsch, M., Kacprzak, T., Rykoff, E., Gruen, D., Armstrong, R., Bacon, D., Bechtol, K., others,

Monthly Notices of the Royal Astronomical Society, 449(3):2219-2238, Oxford University Press, 2015 (article)

ei

DOI [BibTex]

DOI [BibTex]


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Causal Inference in Neuroimaging

Casarsa de Azevedo, L.

Graduate Training Centre of Neuroscience, University of Tübingen, Germany, 2015 (mastersthesis)

ei

[BibTex]

[BibTex]