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2019


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Neural Signatures of Motor Skill in the Resting Brain

Ozdenizci, O., Meyer, T., Wichmann, F., Peters, J., Schölkopf, B., Cetin, M., Grosse-Wentrup, M.

Proceedings of the IEEE International Conference on Systems, Man and Cybernetics (SMC 2019), October 2019 (conference) Accepted

ei

[BibTex]

2019


[BibTex]


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Convolutional neural networks: A magic bullet for gravitational-wave detection?

Gebhard, T., Kilbertus, N., Harry, I., Schölkopf, B.

Physical Review D, 100(6):063015, American Physical Society, September 2019 (article)

ei

link (url) DOI [BibTex]

link (url) DOI [BibTex]


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Data scarcity, robustness and extreme multi-label classification

Babbar, R., Schölkopf, B.

Machine Learning, 108(8):1329-1351, September 2019, Special Issue of the ECML PKDD 2019 Journal Track (article)

ei

DOI [BibTex]

DOI [BibTex]


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Beta Power May Mediate the Effect of Gamma-TACS on Motor Performance

Mastakouri, A., Schölkopf, B., Grosse-Wentrup, M.

Engineering in Medicine and Biology Conference (EMBC), July 2019 (conference) Accepted

ei

arXiv PDF [BibTex]

arXiv PDF [BibTex]


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Coordinating Users of Shared Facilities via Data-driven Predictive Assistants and Game Theory

Geiger, P., Besserve, M., Winkelmann, J., Proissl, C., Schölkopf, B.

Proceedings of the 35th Conference on Uncertainty in Artificial Intelligence (UAI), pages: 49, (Editors: Amir Globerson and Ricardo Silva), AUAI Press, July 2019 (conference)

ei

link (url) [BibTex]

link (url) [BibTex]


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The Sensitivity of Counterfactual Fairness to Unmeasured Confounding

Kilbertus, N., Ball, P. J., Kusner, M. J., Weller, A., Silva, R.

Proceedings of the 35th Conference on Uncertainty in Artificial Intelligence (UAI), pages: 213, (Editors: Amir Globerson and Ricardo Silva), AUAI Press, July 2019 (conference)

ei

link (url) [BibTex]

link (url) [BibTex]


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The Incomplete Rosetta Stone problem: Identifiability results for Multi-view Nonlinear ICA

Gresele*, L., Rubenstein*, P. K., Mehrjou, A., Locatello, F., Schölkopf, B.

Proceedings of the 35th Conference on Uncertainty in Artificial Intelligence (UAI), pages: 53, (Editors: Amir Globerson and Ricardo Silva), AUAI Press, July 2019, *equal contribution (conference)

ei

link (url) [BibTex]

link (url) [BibTex]


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Random Sum-Product Networks: A Simple and Effective Approach to Probabilistic Deep Learning

Peharz, R., Vergari, A., Stelzner, K., Molina, A., Shao, X., Trapp, M., Kersting, K., Ghahramani, Z.

Proceedings of the 35th Conference on Uncertainty in Artificial Intelligence (UAI), pages: 124, (Editors: Amir Globerson and Ricardo Silva), AUAI Press, July 2019 (conference)

ei

link (url) [BibTex]

link (url) [BibTex]


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Kernel Mean Matching for Content Addressability of GANs

Jitkrittum*, W., Sangkloy*, P., Gondal, M. W., Raj, A., Hays, J., Schölkopf, B.

Proceedings of the 36th International Conference on Machine Learning (ICML), 97, pages: 3140-3151, Proceedings of Machine Learning Research, (Editors: Chaudhuri, Kamalika and Salakhutdinov, Ruslan), PMLR, June 2019, *equal contribution (conference)

ei

PDF link (url) [BibTex]

PDF link (url) [BibTex]


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Challenging Common Assumptions in the Unsupervised Learning of Disentangled Representations

Locatello, F., Bauer, S., Lucic, M., Raetsch, G., Gelly, S., Schölkopf, B., Bachem, O.

Proceedings of the 36th International Conference on Machine Learning (ICML), 97, pages: 4114-4124, Proceedings of Machine Learning Research, (Editors: Chaudhuri, Kamalika and Salakhutdinov, Ruslan), PMLR, June 2019 (conference)

ei

PDF link (url) [BibTex]

PDF link (url) [BibTex]


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Local Temporal Bilinear Pooling for Fine-grained Action Parsing

Zhang, Y., Tang, S., Muandet, K., Jarvers, C., Neumann, H.

In Proceedings IEEE Conf. on Computer Vision and Pattern Recognition (CVPR), IEEE International Conference on Computer Vision and Pattern Recognition (CVPR) 2019, June 2019 (inproceedings)

Abstract
Fine-grained temporal action parsing is important in many applications, such as daily activity understanding, human motion analysis, surgical robotics and others requiring subtle and precise operations in a long-term period. In this paper we propose a novel bilinear pooling operation, which is used in intermediate layers of a temporal convolutional encoder-decoder net. In contrast to other work, our proposed bilinear pooling is learnable and hence can capture more complex local statistics than the conventional counterpart. In addition, we introduce exact lower-dimension representations of our bilinear forms, so that the dimensionality is reduced with neither information loss nor extra computation. We perform intensive experiments to quantitatively analyze our model and show the superior performances to other state-of-the-art work on various datasets.

ei ps

Code video demo pdf link (url) [BibTex]

Code video demo pdf link (url) [BibTex]


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Generate Semantically Similar Images with Kernel Mean Matching

Jitkrittum*, W., Sangkloy*, P., Gondal, M. W., Raj, A., Hays, J., Schölkopf, B.

6th Workshop Women in Computer Vision (WiCV) (oral presentation), June 2019, *equal contribution (conference) Accepted

ei

[BibTex]

[BibTex]


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Robustly Disentangled Causal Mechanisms: Validating Deep Representations for Interventional Robustness

Suter, R., Miladinovic, D., Schölkopf, B., Bauer, S.

Proceedings of the 36th International Conference on Machine Learning (ICML), 97, pages: 6056-6065, Proceedings of Machine Learning Research, (Editors: Chaudhuri, Kamalika and Salakhutdinov, Ruslan), PMLR, June 2019 (conference)

ei

PDF link (url) [BibTex]

PDF link (url) [BibTex]


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First-Order Adversarial Vulnerability of Neural Networks and Input Dimension

Simon-Gabriel, C., Ollivier, Y., Bottou, L., Schölkopf, B., Lopez-Paz, D.

Proceedings of the 36th International Conference on Machine Learning (ICML), 97, pages: 5809-5817, Proceedings of Machine Learning Research, (Editors: Chaudhuri, Kamalika and Salakhutdinov, Ruslan), PMLR, June 2019 (conference)

ei

PDF link (url) [BibTex]

PDF link (url) [BibTex]


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Overcoming Mean-Field Approximations in Recurrent Gaussian Process Models

Ialongo, A. D., Van Der Wilk, M., Hensman, J., Rasmussen, C. E.

In Proceedings of the 36th International Conference on Machine Learning (ICML), 97, pages: 2931-2940, Proceedings of Machine Learning Research, (Editors: Chaudhuri, Kamalika and Salakhutdinov, Ruslan), PMLR, June 2019 (inproceedings)

ei

PDF link (url) [BibTex]

PDF link (url) [BibTex]


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Meta learning variational inference for prediction

Gordon, J., Bronskill, J., Bauer, M., Nowozin, S., Turner, R.

7th International Conference on Learning Representations (ICLR), May 2019 (conference) Accepted

ei

arXiv link (url) [BibTex]

arXiv link (url) [BibTex]


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Deep Lagrangian Networks: Using Physics as Model Prior for Deep Learning

Lutter, M., Ritter, C., Peters, J.

7th International Conference on Learning Representations (ICLR), May 2019 (conference) Accepted

ei

link (url) [BibTex]

link (url) [BibTex]


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DeepOBS: A Deep Learning Optimizer Benchmark Suite

Schneider, F., Balles, L., Hennig, P.

7th International Conference on Learning Representations (ICLR), May 2019 (conference) Accepted

ei pn

link (url) [BibTex]

link (url) [BibTex]


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Disentangled State Space Models: Unsupervised Learning of Dynamics across Heterogeneous Environments

Miladinović*, D., Gondal*, M. W., Schölkopf, B., Buhmann, J. M., Bauer, S.

Deep Generative Models for Highly Structured Data Workshop at ICLR, May 2019, *equal contribution (conference) Accepted

ei

link (url) [BibTex]

link (url) [BibTex]


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SOM-VAE: Interpretable Discrete Representation Learning on Time Series

Fortuin, V., Hüser, M., Locatello, F., Strathmann, H., Rätsch, G.

7th International Conference on Learning Representations (ICLR), May 2019 (conference) Accepted

ei

link (url) [BibTex]

link (url) [BibTex]


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Resampled Priors for Variational Autoencoders

Bauer, M., Mnih, A.

22nd International Conference on Artificial Intelligence and Statistics, April 2019 (conference) Accepted

ei

arXiv [BibTex]

arXiv [BibTex]


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Semi-Generative Modelling: Covariate-Shift Adaptation with Cause and Effect Features

von Kügelgen, J., Mey, A., Loog, M.

Proceedings of the 22nd International Conference on Artificial Intelligence and Statistics (AISTATS), 89, pages: 1361-1369, (Editors: Kamalika Chaudhuri and Masashi Sugiyama), PMLR, April 2019 (conference)

ei

PDF link (url) [BibTex]

PDF link (url) [BibTex]


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Sobolev Descent

Mroueh, Y., Sercu, T., Raj, A.

Proceedings of the 22nd International Conference on Artificial Intelligence and Statistics (AISTATS), 89, pages: 2976-2985, (Editors: Kamalika Chaudhuri and Masashi Sugiyama), PMLR, April 2019 (conference)

ei

PDF link (url) [BibTex]

PDF link (url) [BibTex]


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Fast and Robust Shortest Paths on Manifolds Learned from Data

Arvanitidis, G., Hauberg, S., Hennig, P., Schober, M.

Proceedings of the 22nd International Conference on Artificial Intelligence and Statistics (AISTATS), 89, pages: 1506-1515, (Editors: Kamalika Chaudhuri and Masashi Sugiyama), PMLR, April 2019 (conference)

ei pn

PDF link (url) [BibTex]

PDF link (url) [BibTex]


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Fast Gaussian Process Based Gradient Matching for Parameter Identification in Systems of Nonlinear ODEs

Wenk, P., Gotovos, A., Bauer, S., Gorbach, N., Krause, A., Buhmann, J. M.

Proceedings of the 22nd International Conference on Artificial Intelligence and Statistics (AISTATS), 89, pages: 1351-1360, (Editors: Kamalika Chaudhuri and Masashi Sugiyama), PMLR, April 2019 (conference)

ei

PDF PDF link (url) [BibTex]

PDF PDF link (url) [BibTex]


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Active Probabilistic Inference on Matrices for Pre-Conditioning in Stochastic Optimization

de Roos, F., Hennig, P.

Proceedings of the 22nd International Conference on Artificial Intelligence and Statistics (AISTATS), 89, pages: 1448-1457, (Editors: Kamalika Chaudhuri and Masashi Sugiyama), PMLR, April 2019 (conference)

Abstract
Pre-conditioning is a well-known concept that can significantly improve the convergence of optimization algorithms. For noise-free problems, where good pre-conditioners are not known a priori, iterative linear algebra methods offer one way to efficiently construct them. For the stochastic optimization problems that dominate contemporary machine learning, however, this approach is not readily available. We propose an iterative algorithm inspired by classic iterative linear solvers that uses a probabilistic model to actively infer a pre-conditioner in situations where Hessian-projections can only be constructed with strong Gaussian noise. The algorithm is empirically demonstrated to efficiently construct effective pre-conditioners for stochastic gradient descent and its variants. Experiments on problems of comparably low dimensionality show improved convergence. In very high-dimensional problems, such as those encountered in deep learning, the pre-conditioner effectively becomes an automatic learning-rate adaptation scheme, which we also empirically show to work well.

pn ei

PDF link (url) [BibTex]

PDF link (url) [BibTex]


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A 32-channel multi-coil setup optimized for human brain shimming at 9.4T

Aghaeifar, A., Zhou, J., Heule, R., Tabibian, B., Schölkopf, B., Jia, F., Zaitsev, M., Scheffler, K.

Magnetic Resonance in Medicine, 2019, (Early View) (article)

ei

DOI [BibTex]

DOI [BibTex]


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Enhancing Human Learning via Spaced Repetition Optimization

Tabibian, B., Upadhyay, U., De, A., Zarezade, A., Schölkopf, B., Gomez Rodriguez, M.

Proceedings of the National Academy of Sciences, 2019, PNAS published ahead of print January 22, 2019 (article)

ei

DOI Project Page Project Page [BibTex]

DOI Project Page Project Page [BibTex]


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Learning to Control Highly Accelerated Ballistic Movements on Muscular Robots

Büchler, D., Calandra, R., Peters, J.

2019 (article) Submitted

Abstract
High-speed and high-acceleration movements are inherently hard to control. Applying learning to the control of such motions on anthropomorphic robot arms can improve the accuracy of the control but might damage the system. The inherent exploration of learning approaches can lead to instabilities and the robot reaching joint limits at high speeds. Having hardware that enables safe exploration of high-speed and high-acceleration movements is therefore desirable. To address this issue, we propose to use robots actuated by Pneumatic Artificial Muscles (PAMs). In this paper, we present a four degrees of freedom (DoFs) robot arm that reaches high joint angle accelerations of up to 28000 °/s^2 while avoiding dangerous joint limits thanks to the antagonistic actuation and limits on the air pressure ranges. With this robot arm, we are able to tune control parameters using Bayesian optimization directly on the hardware without additional safety considerations. The achieved tracking performance on a fast trajectory exceeds previous results on comparable PAM-driven robots. We also show that our system can be controlled well on slow trajectories with PID controllers due to careful construction considerations such as minimal bending of cables, lightweight kinematics and minimal contact between PAMs and PAMs with the links. Finally, we propose a novel technique to control the the co-contraction of antagonistic muscle pairs. Experimental results illustrate that choosing the optimal co-contraction level is vital to reach better tracking performance. Through the use of PAM-driven robots and learning, we do a small step towards the future development of robots capable of more human-like motions.

ei

Arxiv Video [BibTex]


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AReS and MaRS Adversarial and MMD-Minimizing Regression for SDEs

Abbati*, G., Wenk*, P., Osborne, M. A., Krause, A., Schölkopf, B., Bauer, S.

Proceedings of the 36th International Conference on Machine Learning (ICML), 97, pages: 1-10, Proceedings of Machine Learning Research, (Editors: Chaudhuri, Kamalika and Salakhutdinov, Ruslan), PMLR, 2019, *equal contribution (conference)

ei

PDF link (url) [BibTex]

PDF link (url) [BibTex]


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Inferring causation from time series with perspectives in Earth system sciences

Runge, J., Bathiany, S., Bollt, E., Camps-Valls, G., Coumou, D., Deyle, E., Glymour, C., Kretschmer, M., Mahecha, M., van Nes, E., Peters, J., Quax, R., Reichstein, M., Scheffer, M. S. B., Spirtes, P., Sugihara, G., Sun, J., Zhang, K., Zscheischler, J.

Nature Communications, 2019 (article) In revision

ei

[BibTex]

[BibTex]


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Kernel Stein Tests for Multiple Model Comparison

Lim, J. N., Yamada, M., Schölkopf, B., Jitkrittum, W.

Advances in Neural Information Processing Systems 32, 33rd Annual Conference on Neural Information Processing Systems, 2019 (conference) To be published

ei

[BibTex]

[BibTex]


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MYND: A Platform for Large-scale Neuroscientific Studies

Hohmann, M. R., Hackl, M., Wirth, B., Zaman, T., Enficiaud, R., Grosse-Wentrup, M., Schölkopf, B.

Proceedings of the 2019 Conference on Human Factors in Computing Systems (CHI), 2019 (conference) Accepted

ei

[BibTex]

[BibTex]


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A Kernel Stein Test for Comparing Latent Variable Models

Kanagawa, H., Jitkrittum, W., Mackey, L., Fukumizu, K., Gretton, A.

2019 (conference) Submitted

ei

arXiv [BibTex]

arXiv [BibTex]


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From Variational to Deterministic Autoencoders

Ghosh*, P., Sajjadi*, M. S. M., Vergari, A., Black, M. J., Schölkopf, B.

2019, *equal contribution (conference) Submitted

Abstract
Variational Autoencoders (VAEs) provide a theoretically-backed framework for deep generative models. However, they often produce “blurry” images, which is linked to their training objective. Sampling in the most popular implementation, the Gaussian VAE, can be interpreted as simply injecting noise to the input of a deterministic decoder. In practice, this simply enforces a smooth latent space structure. We challenge the adoption of the full VAE framework on this specific point in favor of a simpler, deterministic one. Specifically, we investigate how substituting stochasticity with other explicit and implicit regularization schemes can lead to a meaningful latent space without having to force it to conform to an arbitrarily chosen prior. To retrieve a generative mechanism for sampling new data points, we propose to employ an efficient ex-post density estimation step that can be readily adopted both for the proposed deterministic autoencoders as well as to improve sample quality of existing VAEs. We show in a rigorous empirical study that regularized deterministic autoencoding achieves state-of-the-art sample quality on the common MNIST, CIFAR-10 and CelebA datasets.

ei ps

arXiv [BibTex]


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Fisher Efficient Inference of Intractable Models

Liu, S., Kanamori, T., Jitkrittum, W., Chen, Y.

Advances in Neural Information Processing Systems 32, 33rd Annual Conference on Neural Information Processing Systems, 2019 (conference) To be published

ei

arXiv [BibTex]

arXiv [BibTex]

2011


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Statistical estimation for optimization problems on graphs

Langovoy, M., Sra, S.

In pages: 1-6, NIPS Workshop on Discrete Optimization in Machine Learning (DISCML): Uncertainty, Generalization and Feedback , December 2011 (inproceedings)

Abstract
Large graphs abound in machine learning, data mining, and several related areas. A useful step towards analyzing such graphs is that of obtaining certain summary statistics — e.g., or the expected length of a shortest path between two nodes, or the expected weight of a minimum spanning tree of the graph, etc. These statistics provide insight into the structure of a graph, and they can help predict global properties of a graph. Motivated thus, we propose to study statistical properties of structured subgraphs (of a given graph), in particular, to estimate the expected objective function value of a combinatorial optimization problem over these subgraphs. The general task is very difficult, if not unsolvable; so for concreteness we describe a more specific statistical estimation problem based on spanning trees. We hope that our position paper encourages others to also study other types of graphical structures for which one can prove nontrivial statistical estimates.

ei

PDF Web [BibTex]

2011


PDF Web [BibTex]


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On the discardability of data in Support Vector Classification problems

Del Favero, S., Varagnolo, D., Dinuzzo, F., Schenato, L., Pillonetto, G.

In pages: 3210-3215, IEEE, Piscataway, NJ, USA, 50th IEEE Conference on Decision and Control and European Control Conference (CDC - ECC), December 2011 (inproceedings)

Abstract
We analyze the problem of data sets reduction for support vector classification. The work is also motivated by distributed problems, where sensors collect binary measurements at different locations moving inside an environment that needs to be divided into a collection of regions labeled in two different ways. The scope is to let each agent retain and exchange only those measurements that are mostly informative for the collective reconstruction of the decision boundary. For the case of separable classes, we provide the exact conditions and an efficient algorithm to determine if an element in the training set can become a support vector when new data arrive. The analysis is then extended to the non-separable case deriving a sufficient discardability condition and a general data selection scheme for classification. Numerical experiments relative to the distributed problem show that the proposed procedure allows the agents to exchange a small amount of the collected data to obtain a highly predictive decision boundary.

ei

PDF Web DOI [BibTex]

PDF Web DOI [BibTex]


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Causal Inference on Discrete Data using Additive Noise Models

Peters, J., Janzing, D., Schölkopf, B.

IEEE Transactions on Pattern Analysis and Machine Intelligence, 33(12):2436-2450, December 2011 (article)

Abstract
Inferring the causal structure of a set of random variables from a finite sample of the joint distribution is an important problem in science. The case of two random variables is particularly challenging since no (conditional) independences can be exploited. Recent methods that are based on additive noise models suggest the following principle: Whenever the joint distribution {\bf P}^{(X,Y)} admits such a model in one direction, e.g., Y=f(X)+N, N \perp\kern-6pt \perp X, but does not admit the reversed model X=g(Y)+\tilde{N}, \tilde{N} \perp\kern-6pt \perp Y, one infers the former direction to be causal (i.e., X\rightarrow Y). Up to now, these approaches only dealt with continuous variables. In many situations, however, the variables of interest are discrete or even have only finitely many states. In this work, we extend the notion of additive noise models to these cases. We prove that it almost never occurs that additive noise models can be fit in both directions. We further propose an efficient algorithm that is able to perform this way of causal inference on finite samples of discrete variables. We show that the algorithm works on both synthetic and real data sets.

ei

PDF Web DOI [BibTex]

PDF Web DOI [BibTex]


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Spontaneous epigenetic variation in the Arabidopsis thaliana methylome

Becker, C., Hagmann, J., Müller, J., Koenig, D., Stegle, O., Borgwardt, K., Weigel, D.

Nature, 480(7376):245-249, December 2011 (article)

Abstract
Heritable epigenetic polymorphisms, such as differential cytosine methylation, can underlie phenotypic variation1, 2. Moreover, wild strains of the plant Arabidopsis thaliana differ in many epialleles3, 4, and these can influence the expression of nearby genes1, 2. However, to understand their role in evolution5, it is imperative to ascertain the emergence rate and stability of epialleles, including those that are not due to structural variation. We have compared genome-wide DNA methylation among 10 A. thaliana lines, derived 30 generations ago from a common ancestor6. Epimutations at individual positions were easily detected, and close to 30,000 cytosines in each strain were differentially methylated. In contrast, larger regions of contiguous methylation were much more stable, and the frequency of changes was in the same low range as that of DNA mutations7. Like individual positions, the same regions were often affected by differential methylation in independent lines, with evidence for recurrent cycles of forward and reverse mutations. Transposable elements and short interfering RNAs have been causally linked to DNA methylation8. In agreement, differentially methylated sites were farther from transposable elements and showed less association with short interfering RNA expression than invariant positions. The biased distribution and frequent reversion of epimutations have important implications for the potential contribution of sequence-independent epialleles to plant evolution.

ei

Web DOI [BibTex]

Web DOI [BibTex]


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Information, learning and falsification

Balduzzi, D.

In pages: 1-4, NIPS Philosophy and Machine Learning Workshop, December 2011 (inproceedings)

Abstract
There are (at least) three approaches to quantifying information. The first, algorithmic information or Kolmogorov complexity, takes events as strings and, given a universal Turing machine, quantifies the information content of a string as the length of the shortest program producing it [1]. The second, Shannon information, takes events as belonging to ensembles and quantifies the information resulting from observing the given event in terms of the number of alternate events that have been ruled out [2]. The third, statistical learning theory, has introduced measures of capacity that control (in part) the expected risk of classifiers [3]. These capacities quantify the expectations regarding future data that learning algorithms embed into classifiers. Solomonoff and Hutter have applied algorithmic information to prove remarkable results on universal induction. Shannon information provides the mathematical foundation for communication and coding theory. However, both approaches have shortcomings. Algorithmic information is not computable, severely limiting its practical usefulness. Shannon information refers to ensembles rather than actual events: it makes no sense to compute the Shannon information of a single string – or rather, there are many answers to this question depending on how a related ensemble is constructed. Although there are asymptotic results linking algorithmic and Shannon information, it is unsatisfying that there is such a large gap – a difference in kind – between the two measures. This note describes a new method of quantifying information, effective information, that links algorithmic information to Shannon information, and also links both to capacities arising in statistical learning theory [4, 5]. After introducing the measure, we show that it provides a non-universal analog of Kolmogorov complexity. We then apply it to derive basic capacities in statistical learning theory: empirical VC-entropy and empirical Rademacher complexity. A nice byproduct of our approach is an interpretation of the explanatory power of a learning algorithm in terms of the number of hypotheses it falsifies [6], counted in two different ways for the two capacities. We also discuss how effective information relates to information gain, Shannon and mutual information.

ei

PDF Web [BibTex]

PDF Web [BibTex]


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A general linear non-Gaussian state-space model: Identifiability, identification, and applications

Zhang, K., Hyvärinen, A.

In JMLR Workshop and Conference Proceedings Volume 20, pages: 113-128, (Editors: Hsu, C.-N. , W.S. Lee ), MIT Press, Cambridge, MA, USA, 3rd Asian Conference on Machine Learning (ACML), November 2011 (inproceedings)

Abstract
State-space modeling provides a powerful tool for system identification and prediction. In linear state-space models the data are usually assumed to be Gaussian and the models have certain structural constraints such that they are identifiable. In this paper we propose a non-Gaussian state-space model which does not have such constraints. We prove that this model is fully identifiable. We then propose an efficient two-step method for parameter estimation: one first extracts the subspace of the latent processes based on the temporal information of the data, and then performs multichannel blind deconvolution, making use of both the temporal information and non-Gaussianity. We conduct a series of simulations to illustrate the performance of the proposed method. Finally, we apply the proposed model and parameter estimation method on real data, including major world stock indices and magnetoencephalography (MEG) recordings. Experimental results are encouraging and show the practical usefulness of the proposed model and method.

ei

PDF Web [BibTex]

PDF Web [BibTex]


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Non-stationary correction of optical aberrations

Schuler, C., Hirsch, M., Harmeling, S., Schölkopf, B.

In pages: 659-666 , (Editors: DN Metaxas and L Quan and A Sanfeliu and LJ Van Gool), IEEE, Piscataway, NJ, USA, 13th IEEE International Conference on Computer Vision (ICCV), November 2011 (inproceedings)

Abstract
Taking a sharp photo at several megapixel resolution traditionally relies on high grade lenses. In this paper, we present an approach to alleviate image degradations caused by imperfect optics. We rely on a calibration step to encode the optical aberrations in a space-variant point spread function and obtain a corrected image by non-stationary deconvolution. By including the Bayer array in our image formation model, we can perform demosaicing as part of the deconvolution.

ei

PDF Web DOI [BibTex]

PDF Web DOI [BibTex]


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Learning low-rank output kernels

Dinuzzo, F., Fukumizu, K.

In JMLR Workshop and Conference Proceedings Volume 20, pages: 181-196, (Editors: Hsu, C.-N. , W.S. Lee), JMLR, Cambridge, MA, USA, 3rd Asian Conference on Machine Learning (ACML) , November 2011 (inproceedings)

Abstract
Output kernel learning techniques allow to simultaneously learn a vector-valued function and a positive semidefinite matrix which describes the relationships between the outputs. In this paper, we introduce a new formulation that imposes a low-rank constraint on the output kernel and operates directly on a factor of the kernel matrix. First, we investigate the connection between output kernel learning and a regularization problem for an architecture with two layers. Then, we show that a variety of methods such as nuclear norm regularized regression, reduced-rank regression, principal component analysis, and low rank matrix approximation can be seen as special cases of the output kernel learning framework. Finally, we introduce a block coordinate descent strategy for learning low-rank output kernels.

ei

PDF Web [BibTex]

PDF Web [BibTex]


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HHfrag: HMM-based fragment detection using HHpred

Kalev, I., Habeck, M.

Bioinformatics, 27(22):3110-3116, November 2011 (article)

Abstract
Motivation: Over the last decade, both static and dynamic fragment libraries for protein structure prediction have been introduced. The former are built from clusters in either sequence or structure space and aim to extract a universal structural alphabet. The latter are tailored for a particular query protein sequence and aim to provide local structural templates that need to be assembled in order to build the full-length structure. Results: Here, we introduce HHfrag, a dynamic HMM-based fragment search method built on the profile–profile comparison tool HHpred. We show that HHfrag provides advantages over existing fragment assignment methods in that it: (i) improves the precision of the fragments at the expense of a minor loss in sequence coverage; (ii) detects fragments of variable length (6–21 amino acid residues); (iii) allows for gapped fragments and (iv) does not assign fragments to regions where there is no clear sequence conservation. We illustrate the usefulness of fragments detected by HHfrag on targets from most recent CASP.

ei

Web DOI [BibTex]

Web DOI [BibTex]


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Reward-Weighted Regression with Sample Reuse for Direct Policy Search in Reinforcement Learning

Hachiya, H., Peters, J., Sugiyama, M.

Neural Computation, 23(11):2798-2832, November 2011 (article)

Abstract
Direct policy search is a promising reinforcement learning framework, in particular for controlling continuous, high-dimensional systems. Policy search often requires a large number of samples for obtaining a stable policy update estimator, and this is prohibitive when the sampling cost is expensive. In this letter, we extend an expectation-maximization-based policy search method so that previously collected samples can be efficiently reused. The usefulness of the proposed method, reward-weighted regression with sample reuse (R), is demonstrated through robot learning experiments.

ei

Web DOI [BibTex]


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Stability Condition for Teleoperation System with Packet Loss

Hong, A., Cho, JH., Lee, DY.

In pages: 760-761, 2011 KSME Annual Fall Conference, November 2011 (inproceedings)

Abstract
This paper focuses on the stability condition of teleoperation system where there is a packet loss in communication channel. Communication channel between master and slave cause packet loss and it obviously leads to a performance degradation and instability of teleoperation system. We consider two-channel control architecture for teleoperation system, and control inputs to remote site are produced by position of master and slave. In this paper, teleoperation system is modeled in discrete domain to include packet loss process. Also, the stability condition for teleoperation system with packet loss is discussed with input-to-state stability. Finally, the stability condition is presented in LMI approach.

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[BibTex]

[BibTex]